Publications

2016

Kodiweera, C., Alexander, A. L., Harezlak, J., McAllister, T. W., & Wu, Y.-C. (2016). Age effects and sex differences in human brain white matter of young to middle-aged adults: A DTI, NODDI, and q-space study. NeuroImage, 128, 180–192. https://doi.org/10.1016/j.neuroimage.2015.12.033
Valim, C., Ahmad, R., Lanaspa, M., Tan, Y., Acácio, S., Gillette, M. A., … Bassat, Q. (2016). Responses to Bacteria, Virus, and Malaria Distinguish the Etiology of Pediatric Clinical Pneumonia. American Journal of Respiratory and Critical Care Medicine, 193(4), 448–459. https://doi.org/10.1164/rccm.201506-1100OC
He, F., Hensel, D. J., Harezlak, J., & Fortenberry, J. D. (2016). Condom Use as a Function of Number of Coital Events in New Relationships. Sexually Transmitted Diseases, 43(2), 67–70. https://doi.org/10.1097/OLQ.0000000000000390
Urbanek, J. K., Harezlak, J., Glynn, N. W., Harris, T., Crainiceanu, C., & Zipunnikov, V. (2016). Stride variability measures derived from wrist-and hip-worn accelerometers. arXiv Preprint arXiv:1606.09459. Retrieved from https://arxiv.org/abs/1606.09459
Oberlin, B. G., Dzemidzic, M., Harezlak, J., Kudela, M. A., Tran, S. M., Soeurt, C. M., … Kareken, D. A. (2016). Corticostriatal and Dopaminergic Response to Beer Flavor with Both fMRI and [11C] raclopride Positron Emission Tomography. Alcoholism: Clinical and Experimental Research, 40(9), 1865–1873. Retrieved from http://onlinelibrary.wiley.com/doi/10.1111/acer.13158/full
Kundu, M. G., Harezlak, J., & Randolph, T. W. (2016). Longitudinal functional models with structured penalties. Statistical Modelling, 16(2), 114–139. Retrieved from http://smj.sagepub.com/content/16/2/114.short
Hensel, D. J., He, F., Harezlak, J., & Fortenberry, J. D. (2016). Daily diary study of adult men’s and women’s event-level sexual motivations and sexual behaviour. Sexual Health. Retrieved from http://www.publish.csiro.au/sh/SH16109
Goñi, J., Harezlak, J., Karas, M., Dzemidzic, M., & Kareken, D. A. (2016). Association of structural brain imaging markers with alcoholism incorporating structural connectivity information: a regularized statistical approach. Retrieved from https://scholarworks.iupui.edu/handle/1805/10153

2015

Malinowska, U., Bergey, G. K., Harezlak, J., & Jouny, C. C. (2015). Identification of seizure onset zone and preictal state based on characteristics of high frequency oscillations. Clinical Neurophysiology: Official Journal of the International Federation of Clinical Neurophysiology, 126(8), 1505–1513. https://doi.org/10.1016/j.clinph.2014.11.007
Eiler, W. J. A., Džemidžić, M., Case, K. R., Soeurt, C. M., Armstrong, C. L. H., Mattes, R. D., … Kareken, D. A. (2015). The apéritif effect: Alcohol’s effects on the brain's response to food aromas in women. Obesity (Silver Spring, Md.), 23(7), 1386–1393. https://doi.org/10.1002/oby.21109
Anderson, A. M., Harezlak, J., Bharti, A., Mi, D., Taylor, M. J., Daar, E. S., … HIV Neuroimaging Consortium. (2015). Plasma and Cerebrospinal Fluid Biomarkers Predict Cerebral Injury in HIV-Infected Individuals on Stable Combination Antiretroviral Therapy. Journal of Acquired Immune Deficiency Syndromes (1999), 69(1), 29–35. https://doi.org/10.1097/QAI.0000000000000532
Monahan, P. O., Stump, T., Coryell, W. H., Harezlak, J., Marcoulides, G. A., Liu, H., … Nurnberger, J. I. (2015). Confirmatory test of two factors and four subtypes of bipolar disorder based on lifetime psychiatric co-morbidity. Psychological Medicine, 1–16. https://doi.org/10.1017/S0033291715000185
Urbanek, J. K., Zipunnikov, V., Harris, T., Fadel, W., Glynn, N., Koster, A., … Harezlak, J. (2015). Prediction of sustained harmonic walking in the free-living environment using raw accelerometry data. arXiv Preprint arXiv:1505.04066. Retrieved from http://arxiv.org/abs/1505.04066
Sanz, H., Aponte, J., Harezlak, J., Dong, Y., Murawska, M., & Valim, C. (2015). drLumi: multiplex immunoassays data analysis. Retrieved from https://cran.fhcrc.org/web/packages/drLumi/vignettes/drLumi.pdf

2014

Korzeniewska, A., Cervenka, M. C., Jouny, C. C., Perilla, J. R., Harezlak, J., Bergey, G. K., … Crone, N. E. (2014). Ictal propagation of high frequency activity is recapitulated in interictal recordings: Effective connectivity of epileptogenic networks recorded with intracranial EEG. NeuroImage, 101, 96–113. https://doi.org/10.1016/j.neuroimage.2014.06.078
Harezlak, J., Cohen, R., Gongvatana, A., Taylor, M., Buchthal, S., Schifitto, G., … HIV Neuroimaging Consortium. (2014). Predictors of CNS injury as measured by proton magnetic resonance spectroscopy in the setting of chronic HIV infection and CART. Journal of Neurovirology, 20(3), 294–303. https://doi.org/10.1007/s13365-014-0246-6
Long, Z., Jiang, Y.-M., Li, X.-R., Fadel, W., Xu, J., Yeh, C.-L., … Dydak, U. (2014). Vulnerability of welders to manganese exposure - A neuroimaging study. Neurotoxicology. https://doi.org/10.1016/j.neuro.2014.03.007
Harezlak, J., He, F., & Fortenberry, J. D. (2014). Study of sexual partner accrual patterns among adolescent women via Generalized Additive Mixed Models. Retrieved from https://scholarworks.iupui.edu/handle/1805/5347

2013

Xu, J., Dydak, U., Harezlak, J., Nixon, J., Dzemidzic, M., Gunn, A. D., … Anand, A. (2013). Neurochemical abnormalities in unmedicated bipolar depression and mania: a 2D 1H MRS investigation. Psychiatry Research, 213(3), 235–241. https://doi.org/10.1016/j.pscychresns.2013.02.008
Kareken, D. A., Dzemidzic, M., Wetherill, L., Eiler, W., Oberlin, B. G., Harezlak, J., … O’Connor, S. J. (2013). Family history of alcoholism interacts with alcohol to affect brain regions involved in behavioral inhibition. Psychopharmacology, 228(2), 335–345. https://doi.org/10.1007/s00213-013-3038-4
Gongvatana, A., Harezlak, J., Buchthal, S., Daar, E., Schifitto, G., Campbell, T., … HIV Neuroimaging Consortium. (2013). Progressive cerebral injury in the setting of chronic HIV infection and antiretroviral therapy. Journal of Neurovirology, 19(3), 209–218. https://doi.org/10.1007/s13365-013-0162-1
Zhu, T., Zhong, J., Hu, R., Tivarus, M., Ekholm, S., Harezlak, J., … Schifitto, G. (2013). Patterns of white matter injury in HIV infection after partial immune reconstitution: a DTI tract-based spatial statistics study. Journal of Neurovirology, 19(1), 10–23. https://doi.org/10.1007/s13365-012-0135-9
Kundu, M. G., & Harezlak, J. (2013). Regression trees for longitudinal data. arXiv Preprint arXiv:1309.7733. Retrieved from http://arxiv.org/abs/1309.7733
Hua, X., Boyle, C. P., Harezlak, J., Tate, D. F., Yiannoutsos, C. T., Cohen, R., … HIV Neuroimaging Consortium. (2013). Disrupted cerebral metabolite levels and lower nadir CD4 + counts are linked to brain volume deficits in 210 HIV-infected patients on stable treatment. NeuroImage. Clinical, 3, 132–142. https://doi.org/10.1016/j.nicl.2013.07.009
Hensel, D., Forenberry, J. D., He, F., & Harezlak, J. (2013). ADULT WOMEN’S SEXUAL MOTIVATIONS AND EVENT LEVEL SEXUAL BEHAVIOR CHOICE. In JOURNAL OF SEXUAL MEDICINE (Vol. 10, pp. 161–162). WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA. Retrieved from http://scholar.google.com/scholar?cluster=16258405436807005841&hl=en&oi=scholarr
Anderson, T., Hensel, D., He, F., Harezlak, J., & Fortenberry, J. (2013). P3. 081 Time to Sexually Transmitted Infections After Negative STI Testing Among Young Adults. Sexually Transmitted Infections, 89(Suppl 1), A173–A173. Retrieved from http://sti.bmj.com/content/89/Suppl_1/A173.2.short

2012

Ott, M. A., Harezlak, J., Ofner, S., & Fortenberry, J. D. (2012). Timing of incident STI relative to sex partner change in young women. Sexually Transmitted Diseases, 39(10), 747–749. https://doi.org/10.1097/OLQ.0b013e3182641ecf
Aalsma, M. C., Blythe, M. J., Tong, Y., Harezlak, J., & Rosenman, M. B. (2012). Insurance status of urban detained adolescents. Journal of Correctional Health Care: The Official Journal of the National Commission on Correctional Health Care, 18(4), 274–284. https://doi.org/10.1177/1078345812455629
Aalsma, M. C., Gudonis, L. C., Jarjoura, G. R., Blythe, M. J., Tong, Y., Harezlak, J., & Rosenman, M. B. (2012). The consequences of juvenile detention reform for mental health and sexually transmitted infection screening among detained youth. The Journal of Adolescent Health: Official Publication of the Society for Adolescent Medicine, 50(4), 365–370. https://doi.org/10.1016/j.jadohealth.2011.08.013
Randolph, T. W., Harezlak, J., & Feng, Z. (2012). Structured penalties for functional linear models-partially empirical eigenvectors for regression. Electronic Journal of Statistics, 6, 323–353. https://doi.org/10.1214/12-EJS676
Hensel, D. J., Fortenberry, J. D., Harezlak, J., & Craig, D. (2012). The feasibility of cell phone based electronic diaries for STI/HIV research. BMC Medical Research Methodology, 12, 75. https://doi.org/10.1186/1471-2288-12-75

2011

Tate, D. F., Sampat, M., Harezlak, J., Fiecas, M., Hogan, J., Dewey, J., … HIV Neuroimaging Consortium. (2011). Regional areas and widths of the midsagittal corpus callosum among HIV-infected patients on stable antiretroviral therapies. Journal of Neurovirology, 17(4), 368–379. https://doi.org/10.1007/s13365-011-0033-6
Aalsma, M. C., Wiehe, S. E., Blythe, M. J., Tong, Y., Harezlak, J., & Rosenman, M. B. (2011). Mental health screening and STI among detained youth. Journal of Community Health, 36(2), 300–306. https://doi.org/10.1007/s10900-010-9311-0
Harezlak, J., Buchthal, S., Taylor, M., Schifitto, G., Zhong, J., Daar, E., … HIV Neuroimaging Consortium. (2011). Persistence of HIV-associated cognitive impairment, inflammation, and neuronal injury in era of highly active antiretroviral treatment. AIDS (London, England), 25(5), 625–633. https://doi.org/10.1097/QAD.0b013e3283427da7
Dydak, U., Jiang, Y.-M., Long, L.-L., Zhu, H., Chen, J., Li, W.-M., … Zheng, W. (2011). In vivo measurement of brain GABA concentrations by magnetic resonance spectroscopy in smelters occupationally exposed to manganese. Environmental Health Perspectives, 119(2), 219–224. https://doi.org/10.1289/ehp.1002192

2010

Cohen, R. A., Harezlak, J., Gongvatana, A., Buchthal, S., Schifitto, G., Clark, U., … HIV Neuroimaging Consortium. (2010). Cerebral metabolite abnormalities in human immunodeficiency virus are associated with cortical and subcortical volumes. Journal of Neurovirology, 16(6), 435–444. https://doi.org/10.3109/13550284.2010.520817
Dewey, J., Hana, G., Russell, T., Price, J., McCaffrey, D., Harezlak, J., … HIV Neuroimaging Consortium. (2010). Reliability and validity of MRI-based automated volumetry software relative to auto-assisted manual measurement of subcortical structures in HIV-infected patients from a multisite study. NeuroImage, 51(4), 1334–1344. https://doi.org/10.1016/j.neuroimage.2010.03.033
Hui, S. L., Perkins, A. J., Harezlak, J., Peacock, M., McClintock, C. L., & Johnston, C. C. (2010). Velocities of bone mineral accrual in black and white American children. Journal of Bone and Mineral Research: The Official Journal of the American Society for Bone and Mineral Research, 25(7), 1527–1535. https://doi.org/10.1002/jbmr.43
Cohen, R. A., Harezlak, J., Schifitto, G., Hana, G., Clark, U., Gongvatana, A., … Navia, B. (2010). Effects of nadir CD4 count and duration of human immunodeficiency virus infection on brain volumes in the highly active antiretroviral therapy era. Journal of Neurovirology, 16(1), 25–32. https://doi.org/10.3109/13550280903552420

2009

Bravata, D. M., Daggett, V. S., Woodward-Hagg, H., Damush, T., Plue, L., Russell, S., … Chumbler, N. R. (2009). Comparison of two approaches to screen for dysphagia among acute ischemic stroke patients: nursing admission screening tool versus National Institutes of Health stroke scale. Journal of Rehabilitation Research and Development, 46(9), 1127–1134.

2008

Harezlak, J., Wu, M. C., Wang, M., Schwartzman, A., Christiani, D. C., & Lin, X. (2008). Biomarker discovery for arsenic exposure using functional data. Analysis and feature learning of mass spectrometry proteomic data. Journal of Proteome Research, 7(1), 217–224. https://doi.org/10.1021/pr070491n

2007

Harezlak, J., Wang, M., Christiani, D., & Lin, X. (2007). Quantitative quality-assessment techniques to compare fractionation and depletion methods in SELDI-TOF mass spectrometry experiments. Bioinformatics (Oxford, England), 23(18), 2441–2448. https://doi.org/10.1093/bioinformatics/btm346
Harezlak, J., Coull, B. A., Laird, N. M., Magari, S. R., & Christiani, D. C. (2007). Penalized solutions to functional regression problems. Computational Statistics & Data Analysis, 51(10), 4911–4925. https://doi.org/10.1016/j.csda.2006.09.034
Harezlak, J., Naumova, E., & Laird, N. M. (2007). LongCriSP: a test for bump hunting in longitudinal data. Statistics in Medicine, 26(6), 1383–1397. https://doi.org/10.1002/sim.2623

2006

Harezlak, J., & Tu, W. (2006). Estimation of survival functions in interval and right censored data using STD behavioural diaries. Statistics in Medicine, 25(23), 4053–4064. https://doi.org/10.1002/sim.2505

2005

Harezlak, J., Ryan, L. M., Giedd, J. N., & Lange, N. (2005). Individual and population penalized regression splines for accelerated longitudinal designs. Biometrics, 61(4), 1037–1048. https://doi.org/10.1111/j.1541-0420.2005.00376.x
Durbán, M., Harezlak, J., Wand, M. P., & Carroll, R. J. (2005). Simple fitting of subject-specific curves for longitudinal data. Statistics in Medicine, 24(8), 1153–1167. https://doi.org/10.1002/sim.1991

2004

Rosenman, M. B., Kraft, S. K., Harezlak, J., Mahon, B. E., Katz, B. P., Wang, J., & Arno, J. N. (2004). Syphilis testing in association with gonorrhea/chlamydia testing during a syphilis outbreak. American Journal of Public Health, 94(7), 1124–1126.
Hensel, D. J., Fortenberry, J. D., Harezlak, J., Anderson, J. G., & Orr, D. P. (2004). A daily diary analysis of vaginal bleeding and coitus among adolescent women. The Journal of Adolescent Health: Official Publication of the Society for Adolescent Medicine, 34(5), 391–394. https://doi.org/10.1016/j.jadohealth.2003.08.007

2003

Khan, A. A., Khan, A., Harezlak, J., Tu, W., & Kroenke, K. (2003). Somatic symptoms in primary care: etiology and outcome. Psychosomatics, 44(6), 471–478. https://doi.org/10.1176/appi.psy.44.6.471
Harezlak, J., Gao, S., & Hui, S. L. (2003). An illness-death stochastic model in the analysis of longitudinal dementia data. Statistics in Medicine, 22(9), 1465–1475. https://doi.org/10.1002/sim.1506
Dunn, D. W., Austin, J. K., Harezlak, J., & Ambrosius, W. T. (2003). ADHD and epilepsy in childhood. Developmental Medicine and Child Neurology, 45(1), 50–54.

2002

Austin, J. K., Dunn, D. W., Caffrey, H. M., Perkins, S. M., Harezlak, J., & Rose, D. F. (2002). Recurrent seizures and behavior problems in children with first recognized seizures: a prospective study. Epilepsia, 43(12), 1564–1573.
Zhou, X.-H., & Harezlak, J. (2002). Comparison of bandwidth selection methods for kernel smoothing of ROC curves. Statistics in Medicine, 21(14), 2045–2055. https://doi.org/10.1002/sim.1156
Dunn, D. W., Harezlak, J., Ambrosius, W. T., Austin, J. K., & Hale, B. (2002). Teacher assessment of behaviour in children with new-onset seizures. Seizure: The Journal of the British Epilepsy Association, 11(3), 169–175. https://doi.org/10.1053/seiz.2001.0612
Fortenberry, J. D., Tu, W., Harezlak, J., Katz, B. P., & Orr, D. P. (2002). Condom use as a function of time in new and established adolescent sexual relationships. American Journal of Public Health, 92(2), 211–213.
Bong, C. T. H., Harezlak, J., Katz, B. P., & Spinola, S. M. (2002). Men are more susceptible than women to pustule formation in the experimental model of Haemophilus ducreyi infection. Sexually Transmitted Diseases, 29(2), 114–118.

2001

Moe, S. M., Zekonis, M., Harezlak, J., Ambrosius, W. T., Gassensmith, C. M., Murphy, C. L., … Batiuk, T. D. (2001). A placebo-controlled trial to evaluate immunomodulatory effects of paricalcitol. American Journal of Kidney Diseases: The Official Journal of the National Kidney Foundation, 38(4), 792–802. https://doi.org/10.1053/ajkd.2001.27697
Katz, B. P., Fortenberry, J. D., Tu, W., Harezlak, J., & Orr, D. P. (2001). Sexual behavior among adolescent women at high risk for sexually transmitted infections. Sexually Transmitted Diseases, 28(5), 247–251.
Austin, J. K., Harezlak, J., Dunn, D. W., Huster, G. A., Rose, D. F., & Ambrosius, W. T. (2001). Behavior problems in children before first recognized seizures. Pediatrics, 107(1), 115–122.

2000

Huberty, T. J., Austin, J. K., Harezlak, J., Dunn, D. W., & Ambrosius, W. T. (2000). Informant Agreement in Behavior Ratings for Children with Epilepsy. Epilepsy & Behavior: E&B, 1(6), 427–435. https://doi.org/10.1006/ebeh.2000.0119
Al-Tawfiq, J. A., Harezlak, J., Katz, B. P., & Spinola, S. M. (2000). Cumulative experience with Haemophilus ducreyi 35000 in the human model of experimental infection. Sexually Transmitted Diseases, 27(2), 111–114.

 

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